Production of an efficient enzymatically Fab fragment antivenom against of Cobra snake (Naja naja oxiana) venom

Document Type : Original Articles

Authors

1 plasma dept.

2 plasma purification dept.

10.32592/ARI.2024.79.2.411

Abstract

َAbstract
Since about 100 years ago, the best and main treatment for millions of global snakebite victims has been the use of polyclonal antivenoms. However, common antivenoms need continuous improvement to reduce rare, their side effects and get faster performance. In this study, by papain digestion of anti-cobra venom plasma and subsequently multi-step purification and optimization, including, ammonium sulfate precipitation and subsequently DEAE-cellulose column chromatography, Fab antivenom was produced. Then, by SDS-PAGE method, and double immunodifusion (Ouchterlony) tests the existence of the corresponding Fab fragment antibody was seen and confirmed. Also, in potency test in NIH laboratory mice, it was found that each milliliter of the new Fab antivenom was able to neutralize 624 micrograms, (80LD50) of cobra venom, which is about 15% more efficient than the primary plasma in the same concentration and also, 1.57 times more than the cobra antivenom which found in commercial hexavalent antivenom of Razi Institute respectively. According to the results, it seems that this new Fab antivenom can be used as a new candidate for the treatment of cobra snake bite victims.  
 

Keywords

Main Subjects


  1. Introduction

Snakes spread in most parts of the world, and so far, about 3,000 species have been identified, of which about 400 species are poisonous and only 50 species can be dangerous for humans. The annual number of snakebites in the world reaches 5 million, and the death rate is about 100,000 people. According to the related research, more than 21 species of semi-poisonous and poisonous snakes and 35 species of non-poisonous snakes have been identified in Iran, which cause 6,500 bites and 3-9 deaths each year (7). Although the number of casualties is not high, since the physical injuries inflicted on victims are relatively high, such bites become a real threat. Snake venom is an oily liquid with a white-to-yellow color and a slightly acidic pH. Fresh snake venom has a specific gravity of about 1.03 to 1.05, and its powder dissolves in water and normal saline solution (23). Snake venom contains a mixture of different enzymes and polypeptides and also may contain neurotoxins, proteolytic and hemolytic polypeptides, blood coagulants, phosphatases, cholinesterase, hyaluronidase, aminoacidoxidase and other enzymes and inorganic ions that stored in special glands that are equivalent to human parotid glands. At the time of the snakebite, venom is injected into the victim's body through their hollow fang's teeth. Clinically, the venoms of the elapidae snake family, such as cobras, are nerve-oriented, while, Viperidae and sea snake venoms, are blood-oriented and muscle-oriented, respectively. Nerve-oriented venoms cause paralysis, including respiratory muscle paralysis, suffocation, and other symptoms (14, 2, 24). Currently, in the Razi Institute of Iran, hexavalent antivenom containing F(ab)2 antibody fragments is made against six Iranian venomous snakes, including Naja naja oxiana, Vipera lebetina, Echis carinatus, Vipera albicornuta, Agkistrodon halys, and Pseudocerastes persicus, which are classified into three families Elapidae, Viperidae and Crotalidae (19). Papain is a cysteine ​​protease enzyme obtained from the white liquid (latex) of the papaya plant (Carica papaya). This enzyme has a high optimum temperature (65°C) and a wide pH range from 5-8 for its activity. Papain is widely used in different industries such as food, pharmaceuticals (e.g., antibody digestion), meat tenderness, and also protects plants from insects (16). For more than one century, the mainstay of primary treatment for snakebite victims has been the administration of antivenoms (5). Common methods for the production of heterologous antivenoms, require the immunization of animals such as horses, sheep, goats, and rabbits (9,12). Usually, most of the antivenoms are prepared against crude snake venoms in horses. Active components of antivenoms are antibody molecules that cause the release of blocked acetylcholine receptors in snakebite victims. These antivenoms based on their antibody type, usually classified into three groups. The first group is less common, and its antibody component is usually intact IgG molecule with a molecular weight of about 150 kDa and speed of its distribution in the body is slow and its side effects are more likely than the other two groups. The second group of antivenoms, containing F(ab)2 fragment molecule with a molecular weight of about 100-110 kDa with the highest amount of production and consumption in the world. The third type of antivenoms contain Fab fragment molecule with a molecular weight of about 50 kDa. In terms of persistence in blood plasma, although IgG or F(ab’)2 antivenoms persist in the circulation for a longer period of time, Fab molecules due to being smaller than the other two groups, are removed sooner from the victim's body. However, Fab fragment molecules, unlike the other two molecules, have a faster spread and penetration in body tissues (1, 6, 25, 26). Due to the emergence of side effects such as serum sickness or anaphylaxis reactions along with the use of common antivenoms which may be due to protein aggregation or a few impurities (8, 19), it has always been necessary to carry out scientific work such as the current work to produce antivenoms with fewer side effects and more efficiency.

 

  1. Materials and Methods

2.1. Digestion and purification of plasma

Fifty ml of anti-cobra venom hyperimmune equine plasma was diluted in 100 ml of PBS 1X buffer, and its pH was adjusted to 7.2. Afterward, the mixture of papain enzyme (17 mg/cc) and activation buffer was placed at 37oC for half an hour at a temperature of 65°C for half an hour, and then the activated enzyme was added to diluted plasma at a final concentration of 3 mM and then the mixture was incubated at 37°C for 20 h. At the end of incubation, enzyme activity was stopped using iodoacetamide solution (2.8 g/l). Then, to purify the digested plasma, 50% ammonium sulfate solution was added to the plasma twice in 23% and 20% final concentration and placed on the stirrer in the incubator and laboratory temperature, respectively, and was dialyzed after each centrifugation (4025 rcf, 20°C, 20 min). Again, for more purification, saturated ammonium sulfate was added twice in 33% and 22% of the final concentration to the digested plasma and overnight incubated constantly at the refrigerator and laboratory temperature for 50 min, respectively. Same as the previous step, after each centrifugation (4025 rcf, 20OC, 20 min.), the mixture was dialyzed using a dialysis bag (10 kDa cut-off) immersed in PBS 1X for 48 hours. Afterward, the mixture was more purified by DEAE-Cellulose ion exchange column. Finally, the Fab solution was filtered with a 0.2 micrometer syringe filter and stored in the refrigerator for future usage.

2.2. Protein assay and SDS-PAGE test

Using the Nanodrop device, the amount of protein of Fab antivenom, the primary crude plasma and purified plasma were measured. In addition, to check the presence of 50kDa bands corresponding to the antibody Fab fragment in the new Fab antivenom, 12% SDS-PAGE gel under non-reducing condition and coomassie brilliant blue R-250 staining were used.

2.3. Ouchterlony Test

In addition to SDS-PAGE technique, Ouchterlony test was also used to check the presence of Fab fragment antibodies in the new Fab antivenom. For this, 10 ml of 1% agarose gel in PBS 1X was prepared and poured into a 55 mm Nunc plate. After cooling and hardening of the agarose gel, 5 wells were made on four sides and one in the center of the plate. Next, 100 µl of cobra venom solution was poured in the center well, and also the same amount of anti-cobra venom plasma, hexavalent serum of the Razi institute, purified plasma, and Fab antivenom were poured in the four surrounding wells, respectively. Eventually the plate was placed inside the refrigerator at the temperature of 4oC, and the result was recorded after 96-120 h.

2.4. Potency test

To determine the neutralizing performance of the new Fab antivenom, a potency test was performed in laboratory Syrian mice. For this, seven 10 ml tubes were selected for seven groups of 18-20 g NIH laboratory mice, and the necessary materials were poured to them as presented in Table 1. The tubes were placed in the incubator at a constant temperature of 37oC for 30 min.

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Afterward, 31 NIH Syrian mice weighing 18-20 grams, according to the Table 1, were randomly divided into seven groups, and the contents of each tube was intravenously injected to tail vein of mice of each group (0.5cc/mouse). Then, after placing of food and water bottle, their cages were placed in the experimental animal room with proper temperature (22°C) and ventilation, and after 24 h, the number of dead and alive mice in each group were recorded.

 

  1. Results

3.1. Digestion and purification of plasma

The digested and purified plasma were dialyzed twice, and SDS-PAGE test was performed to check the presence of a 50 kDa band corresponding to the Fab fragment antibody on the new Fab antivenom (Figure 1). According to Figure 1, although the 50 kDa band corresponding to the Fab fragment is not present in the one-twentieth diluted crude plasma (lane 2), it is clearly seen in the produced Fab antivenom (lanes 3 and 4).

3.2. Protein assay

The total protein of monovalent crude anti-cobra venom plasma, the purified plasma, and the new Fab antivenom were measured using a Nanodrop device, and the results are illustrated in Table 2.

3.3. Ouchterlony test

To check the presence of Fab fragment in the new Fab antivenom, Ouchterlony plate was prepared and seen after 96-120 h of incubation in refrigerator. As shown in Figure 2, the wells No. 1, 2 and 3, that contained bivalent antibody molecules, showed a clear precipitation band, especially the crude plasma and hexavalent serum (wells No. 1 and 2), which have formed stronger precipitation

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

           
   
 
     
 
     

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

bands. However, well No. 4, which contained new Fab antivenom, formed no precipitation band, and this could indicate that the produced Fab antivenom contained monovalent Fab fragment and, therefore, formed no precipitation band.

3.4. Potency test

The results of the potency test revealed that, the neutralization effect of Fab antivenom is higher than the

primary monovalent anti-cobra venom plasma, so that each milliliter of the new Fab antivenom was able to neutralize a maximum of 80LD50 (624μg) of cobra snake venom, while the primary plasma was able to neutralize the cobra venom at a maximum of 35LD50 (273 μg) or, in other words, about 15% more efficient than the primary plasma in the same concentration (Figure 3).

 

  1. Discussion

Venomous snakebites are serious threat, and annually around 5 million people worldwide get bitten by them, and the mortality rate is estimated to be more than 100,000 people. Most bites and fatalities occur in rural areas of tropical regions (7,13). The use of horse-derived antivenoms is the choice of treatment for snakebite victims, and they cause a rapid reduction in the symptoms of poisoning in the victims. However, the use of current antivenoms has some unwanted side effects, such as early anaphylactic shock and delayed serum sickness, which may be seen in some people treated by them. Before using horse antivenoms, many patients may have been sensitized to horse proteins, for example, through receiving anti-tetanus serum or in some people, they may have developed antibodies against these proteins (4).

 

 
   

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

Common antivenoms are usually divided into three groups based on their main and active component; Fab or F(ab)2 fragment and intact IgG (25). Each of these antivenoms has specific advantages and weaknesses. For example, although the Fab fragment antibody with a molecular weight of about 50 kDa has faster tissue distribution and penetration and fewer side effects, its circulation duration in the body is less than the other two molecules (12). The antivenoms containing the F(ab)2 fragment antibody with a molecular weight of about 100-110 kDa are intermediate between the other two, and current antivenoms are generally of this type. The third group, is less common, and its antibody component is usually intact IgG molecules with a molecular weight of about 150 kDa, and volume of its distribution in the body is slow, and side effects are more likely than the other two groups (4, 19). To produce Fab fragment antibody, enzymatic and chemical digestion or molecular and gene expression methods may be used, each of which has certain advantages and disadvantages (10, 26). For example, through molecular and gene expression in eukaryotic or prokaryotic cells, different amount of Fab fragment antibody, from 0.1 mg/liter to 1-2 g/liter of culture medium have been mentioned (15, 18, 19, 20, 22). In the enzymatic digestion method, it has shown efficiency from 10% to 35% (11, 15, 16, 26). The digestion efficiency obtained in this research, was 29.0%, which is a relatively good percentage compared to the works of other researchers. Various methods have been suggested for the purification of Fab and immunoglobulins, including ammonium sulfate (3, 21), caprylic acid (12, 17, 21), ion exchange, and L, A, and G proteins (11, 16). Some of these methods

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

are usually used together to increase their efficiency. In this research, the combined methods of ammonium sulfate and ion exchange were used, which according to the results obtained from SDS-PAGE and Ouchterlony tests, a large part of unwanted proteins were removed, while preserving the Fab fragment antibodies. For measuring neutralizing potency of antivenom, mice are usually used, during which, specific amounts of antivenom are mixed with venom whose lethality is determined in the form of LD50 and after a half-hour incubation at 37o C were injected to the mice. The criteria for deciding to increase or decrease the amount of venom and finally determining the strength of the antivenom, is the survival rate of the two-thirds of the mice within 24 h after the injection . In this research, NIH mice were used to determine the neutralizing potency of the produced Fab antivenom. The results of the potency test in mouse tail injection showed that each milliliter of produced Fab antivenom can neutralize 624μg (80LD50) of cobra venom, which is more than the primary crude plasma with 35LD50 or 51 LD50 of the commercial hexavalent antivenom of Razi Institute respectively. According to the tests, 100% of the Fab antivenom injected mice survived. Based on the results of measuring the protein concentration of Fab antivenom and primary anti-cobra venom plasma with a Nanodrop device, the amount of Fb antivenom protein was 78.57 mg/cc and for plasma was 75/74 mg/cc, it can be seen that the protein concentration of Fab antivenom was only 0.04 times higher than the protein concentration of the original plasma, while its neutralizing potency has increased by 2.3 times outwardly, but in more precisely about 15%  more efficient than the primary plasma in the same concentration. According to the results and specially the potency test, it seems that the produced new Fab antivenom can be proposed as a new product candidate alone or in combination with other antivenoms for treating snakebite victims.

  1. References

    1. Abbas A. K., Lichtan AH, Pillai Sh. Cellular and molecular. Immunology Translators: Musa MA, Mohsen S, Khosrow S, Mohammad H Gh., Mohammad HV, Laleh H. Publishers, Arjmand, second edition,1389.
    2. Amrullahi BE. Identification and purification of anticoagulant agent in Jafari Viper. Master's Thesis of Faculty of Basic Sciences and Agriculture, Payame Noor University, Tehran, 1390
    3. Ana CG, Elsa B. Antibody purification: ammonium sulfate fractionation or gel filtration. Methods Mol. Biol. 2010; 588, 15-26
    4. Ariaratnam CA, Meyer WP, Perera G, Eddleston M, Kuleratne SAM, Attapattu W, Sheriff R, Richards AM, Theakston RDG, Warrell DA. A new monospecific ovine Fab fragment antivenom for treatment of envenoming by the Sri Lankan Russellˊsnviper (Daboia RusseLII RusseLII): A preliminary dose-finding and pharmacokinetic study. Am. J. Trop. Med. Hyg., 1999; 61(2), pp: 295-265
    5. Elda ES, Jacob AG, John CP, Alexis RA, Peter BC John CP. The efficacy of two antivenoms against the venom of North American snakes,Toxicon 2003; 41(3), 1 March: 357-365
    6. Hafezi Gh, Rahmani A, Soleymani M, Nazari P. An Epidemiologic and Clinical Study of Snake Bites during a Five-Year Period in Karoon, Iran. ASIA PACIFIC JOURNAL of Medical Toxicology APJMT, 2018; 7;1 http://apjmt.mums.ac.ir March
    7. Harry F, Williams HJ, Layfield T, Vallance K, Patel AB, BicknellSA, Trim SV. The Urgent Need to Develop Novel Strategies for the Diagnosis and Treatment of Snakebites. Toxins. 2019; 11(6), 363
    8. Helen M, Yvonne PProduction of antibodies. Current protocols in immunology.1995; Section II, 2.4.1-2.4.9
    9. Hui C, Jun-Sheng C, Pameila P, Tanja J, Si-Yi B, Jian-Wei Z, Yun-Sheng Y. Strategies and Applications of Antigen-Binding Fragment (Fab) Production in Escherichia coli. Pharmaceutical Fronts.2021; Vol. 3 No. 2
    10. Hyung-Nam S, Dong-Hyung K, Sung-Goo P, Myung KL, SeHwan P, Eui-Jeon W. Purification and characterization of Fab fragments with rapid reaction kinetics against myoglobin. Bioscience, Biotechnology, and Biochemistry. 2014; Vol. 79, No. 5, 718–724
    11. Ibrahim Al-A, Nicholas RC, John L. Single-reagent one-step procedure for the purification of ovine IgG, F(ab')2 and Fab antivenoms by caprylic acid. J. of Immunological Methods.2014; 402, 1–2, 15 January 2014, Pages 15-22
    12. Koh DCI, Armugam A, Jeyaseelan K. Snake venom components and their applications in biomedicine. Cell. Mol. Life Sci. 2006; 63: 3030–3041
    13. Latifi M. Snakes of Iran, first ed.; Published by Environmental Protection Org. 1364
    14. Marija B, Daniel XJ, Barbara GK, Thomas CM, Mats AAP, Felix AR. Efficient method for production of high yields of Fab fragments in Drosophila S2 cells. Protein Engineering, Design & Selection, 2010; vol. 23 no. 4 pp. 169–174
    15. Matthew C, Hanieh K. Soluble papain to digest monoclonal antibodies; time and cost-effective method to obtain Fab fragment. Bioengineering 2022; 9, 209
    16. Michella MM, Andrew P. A simple, non-chromatographic procedure to purify immunoglobulins from serum and ascites fluid. J of Immunological methods. 1987; 96, 271-278
    17. Motedayen MH, Nikbakht BGH, Rasaee MJ, Zare MA, khorasani A, Eizadi H, Ranjbar MM, Azimi M, Esmaelizad M. Production of a Human Recombinant Polyclonal Fab Antivenom against Iranian Viper Echis carinatus. Archives of Razi Institute, 2018; Vol. 73, No. 4 287-294
    18. Motedayen MM, Nikbakhat B GH, Rasaee MJ, Zare MA. Production of recombinant Fab fragment of polyclonal antibody against venom of poisonous snakes, using a phage display library technique and evaluation of its antivenom activity in Syrian laboratory mouse. University of Tehran, faculty of veterinary medicine. Thesis. 2015: No. 599
    19. Nicolas A, Julien M, Jean CP, Herve R, Max G, Christiane D, Philippe B. Engineering of a recombinant Fab from a neutralizing IgG directed against scorpion neurotoxin AahI, and functional evaluation versus other antibody fragments. Toxicon. 2004; 43 : 233–241
    20. Pavinee S, Sukanya E Kavi R.. A study on the use of caprylic acid and ammonium sulfate in combination for the fractionation of equine antivenom F(ab')2. Biologicals. 2012; Sep; 40(5):338-44. doi: 10.1016/j.biologicals.2012.05.002. Epub 2012 Jun 15.
    21. Robert R, Eric B, Elisabeth TW, Eran R, Rivka A, Yael Y, Michael M, Irina C, Sarit K, Dalia R, Achim K, Silke R, Josef P, Karin J, Dirk W, Susanne B, Titus K, Avner Y, Christine R. Human combinatorial Fab library yielding specific and functional antibodies against the human fibroblast growth factor receptor 3. 2003; J Biol Chem Oct 3;278(40):38194-205.  doi: 10.1074/jbc.M303164200. Epub 2003 Jul 3.
    22. Teimurzadeh Sh, Zare MA. Poisonous snakes of Iran. Prevention and first aid and treatment. Publishers, Teimurzadeh. 1388
    23. Tizard A. Veterinary immunology. Translators: Rabbani M, Mahzounieh M, Publishing and printing. 1383 Institute of Tehran University
    24. WHO. Guidelines for the Production, Control and Regulation of Snake Antivenom Immunoglobulins (2016).
    25. Yonghong Z, Lester G, Haiyan J, Audrey B, Eric E, Galina O, Jill C, Susann T, Bernard A. Two routes for production and purification of Fab fragments in biopharmaceutical discovery research: Papain digestion of mAb and transient expression in mammalian cells. Protein Exper. Purif. Oct, 2009; 67(2), 182-9